Protein Alignment Rbp6 and Hrb87F

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 81/224 - (36%)
• Similarity: 117/224 - (52%)
• Gaps: 10/224 - (4%)

  Fly    25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
            |....|:|||||.::|:.:.|:.:|.::|:|.:.:|||||.|:|||||||:|:|....:|.....
  Fly    20 PEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84

  Fly    90 GTHELDGKKVDPKVAFPRRA--HPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFD 152
            ..|::||:.|:||.|.||:.  .|......||:|||||......|.::.||:.||.|....::.|
  Fly    85 RPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSD 149

  Fly   153 KQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVM----LPANLAKTRAAGRS 213
            |.|.:.|||.|:.|...|.|||:.....|.|.||.::.|||..|:.|    ........||.||.
  Fly   150 KDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGGGGGRGGPRAGGRG 214

  Fly   214 AYGELVV----WGSSHAHSTAATSAAAAG 238
            ..|:...    ||..:..:.......|.|
  Fly   215 GQGDRGQGGGGWGGQNRQNGGGNWGGAGG 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	33/74 (45%)
		RRM2_MSI	119..192	CDD:240769	28/72 (39%)
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	34/76 (45%)
		RRM_SF	116..188	CDD:473069	28/71 (39%)