DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and LOC4576768

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_001237856.3 Gene:LOC4576768 / 4576768 VectorBaseID:AGAMI1_002317 Length:361 Species:Anopheles gambiae


Alignment Length:180 Identity:80/180 - (44%)
Similarity:115/180 - (63%) Gaps:9/180 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPN 81
            |..|.|...:|..|:|:|||||:|:.:.||::||:||:|....|..||.|.|||||.|:.:...:
Mosquito    56 GSDSQSNARDDERKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASD 120

  Fly    82 SVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIED 146
            |:|||:..|.|.|:.||||||.|   :|.|      .|||||||::..:.|::|::|.|||.|.:
Mosquito   121 SIDKVVAAGEHVLNNKKVDPKRA---KARP------GKIFVGGLTSDISDEEIKTFFGQFGTIVE 176

  Fly   147 AMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK 196
            ..|.||||.|:.:||.|:|::|..||:::.:.....|..|.|:.|||.||
Mosquito   177 VELPFDKQKNQRKGFCFITYESVQVVNELLKTPKQTIAGKEVDVKKATPK 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 38/74 (51%)
RRM2_MSI 119..192 CDD:240769 30/72 (42%)
LOC4576768XP_001237856.3 None

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