Protein Alignment Rbp6 and rbm38

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_001006916.1
• Gene: rbm38 / 448763
• XenbaseID: XB-GENE-489545
• Length: 219
• Species: Xenopus tropicalis
• Alignment Length: 260
• Identity: 59/260 - (22%)
• Similarity: 96/260 - (36%)
• Gaps: 77/260 - (29%)

  Fly    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHEL 94
            |:|:|||.:.|:..|||.||..:|||.||:|:.|..|.:|||:||||.||..:.::........:
 Frog    12 KIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAAERACKDPNPII 76

  Fly    95 DGKKVDPKVAF----PR-----------RAHPKMVTR----------TKKIFVGGLSAPTTLEDV 134
            ||:|.:..:|:    ||           :.||..:.|          ...|....:..||.:..:
 Frog    77 DGRKANVNLAYLGAKPRNLQSAFTIGVQQLHPAFIQRPFGLTPQYIYPPAIVQPSVVIPTPIPSL 141

  Fly   135 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVM 199
            :|.:..:.....|...:  .|..:..:.:
 Frog   142 QSPYIDYNAATQAFTHY--TTAAYEQYPY------------------------------------ 168

  Fly   200 LPANLAKTRAAGRSAYGELVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQ 264
                 |.:.|.|...||   ...:.....:|.|:.|..|..|:      :.:|.|.||.|..:.|
 Frog   169 -----AASPATGYMGYG---YTSAVQQPLSATTTTATTGAPPT------AYIQYQPQQLQPDRMQ 219

  Fly   265  264
             Frog   220  219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	31/74 (42%)
		RRM2_MSI	119..192	CDD:240769	6/72 (8%)
rbm38	NP_001006916.1	RRM_RBM24_RBM38_like	11..86	CDD:409818	31/73 (42%)
		PABP-1234	<23..187	CDD:130689	42/209 (20%)