DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and tra2b

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_001006878.1 Gene:tra2b / 448667 XenbaseID:XB-GENE-5864557 Length:293 Species:Xenopus tropicalis


Alignment Length:90 Identity:31/90 - (34%)
Similarity:49/90 - (54%) Gaps:5/90 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGT-HELDGKK 98
            |||..|:...||:.|.:||.||:..::.|..:||||||.||.|.:.:...:...:.. .||||::
 Frog   128 GLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRR 192

  Fly    99 VDPKVAFPRRAHPKMVTRTKKIFVG 123
            :....:..:|.|    |.|..|::|
 Frog   193 IRVDFSIT
KRPH----TPTPGIYMG 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 25/70 (36%)
RRM2_MSI 119..192 CDD:240769 2/5 (40%)
tra2bNP_001006878.1 RRM_TRA2 121..200 CDD:409798 25/71 (35%)

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