DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and tra2a

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_012819962.1 Gene:tra2a / 448073 XenbaseID:XB-GENE-492325 Length:341 Species:Xenopus tropicalis


Alignment Length:100 Identity:38/100 - (38%)
Similarity:53/100 - (53%) Gaps:8/100 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DPGKMFIG--GLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSD-PNSVDKVLT 88
            || .:.||  |||..|:...||:.|.|||.:|...|:.|..|.|||||.||.|.. .:|.:.:..
 Frog   111 DP-NICIGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEH 174

  Fly    89 QGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVG 123
            ....||||:::....:..:|||    |.|..|::|
 Frog   175 ANGMELDGRRIRVDYSITKRAH----TPTPGIYMG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 29/77 (38%)
RRM2_MSI 119..192 CDD:240769 1/4 (25%)
tra2aXP_012819962.1 RRM_TRA2A 110..193 CDD:410047 31/82 (38%)

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