Protein Alignment Rbp6 and msi2b

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_957403.1
• Gene: msi2b / 394084
• ZFINID: ZDB-GENE-040426-1268
• Length: 408
• Species: Danio rerio
• Alignment Length: 436
• Identity: 194/436 - (44%)
• Similarity: 238/436 - (54%)
• Gaps: 63/436 - (14%)

  Fly    20 SPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 84
            ||::..:||||||||||||||||:||||||.::|:|.|.|||:||||:||||||||||:|..|||
Zfish    12 SPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVD 76

  Fly    85 KVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAML 149
            |||.|..||||.|.:||||||||||.|||||||||||||||||.|.:||||.||||||.:|||||
Zfish    77 KVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141

  Fly   150 MFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSA 214
            ||||.||||||||||||::||||:||||||||||||||||||||||||||.|.. .:.||.|...
Zfish   142 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPG-TRGRARGLPY 205

  Fly   215 YGELVVWGS---SHAHSTAATSAAAAGLLPS--------------SLAAAASVLQQQQQQQQQQQ 262
            ..:..:.|.   |:.:..|.......|..||              .:||||:|...:...:..:.
Zfish   206 TMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQFPGFPATAYGPVAAAAAVAAARGSGRGARG 270

  Fly   263 QQQQQQQQHHQQLHHTHPQSPAHSHAHHPHTHSHSQLLG-SLRYTPYPLPAHLSAAAVVVAQQQH 326
            :..          :..:|||.......:....|.|...| ...:..|   ..|...|..:.|.:|
Zfish   271 RGG----------YAAYPQSTGPGFPDYGFYSSPSDQRGPPFSFADY---GSLGPQAAQLLQSEH 322

  Fly   327 HHQQQQQQQQQQQQQQVVAAQQQHQQQQSLAQVVAAAAGAAPGLLPLANPAPPATPSLLQFAAGQ 391
            .........|.      :|:..|::               :||..|   |.|.|.|       |.
Zfish   323 ATSACNSPLQH------LASPDQYK---------------SPGTNP---PRPGAFP-------GA 356

  Fly   392 SNAALANSLYADAAAVVGYKRLLAAAAVSSGLRAPTTALGALQAAA 437
            |:......||...:...|....::||:...|.....:..|.|.|.|
Zfish   357 SSPGPVADLYGPTSQDSGVGNYISAASPQPGSGFGHSIAGPLIATA 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	56/74 (76%)
		RRM2_MSI	119..192	CDD:240769	62/72 (86%)
msi2b	NP_957403.1	RRM1_MSI2	17..109	CDD:410153	70/91 (77%)
		RRM2_MSI	111..184	CDD:240769	62/72 (86%)