DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rbp6 and CG3335

DIOPT Version :9

Sequence 1:	NP_001097631.1	Gene:	Rbp6 / 39919	FlyBaseID:	FBgn0260943	Length:	499	Species:	Drosophila melanogaster
Sequence 2:	NP_648337.1	Gene:	CG3335 / 39119	FlyBaseID:	FBgn0036018	Length:	918	Species:	Drosophila melanogaster

Alignment Length:	297	Identity:	70/297 - (23%)
Similarity:	111/297 - (37%)	Gaps:	71/297 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 DIKIEQQQQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMK--DP 64
            |.|.:::..:.:      ...:.|.....:|:..|:::|..|::..:|...|.|....:.|  ||
  Fly   658 DAKPDEEDSRAE------DADDEPEPNTTLFLRNLNFKTVQETVEKHFRHLGSIHTVEIAKRRDP 716

  Fly    65 TTRR---SRGFGFVTFSDPNSVDKVL--TQGTHELDGKKVDPK------------VAFPRRAHPK 112
            ...|   |.|:||:.|...:..:..|  .|.|| :||..|:.|            .|..|.|..|
  Fly   717 ENPREFKSLGYGFIQFKKSSVAEHALKNLQLTH-IDGNPVELKRSDRVLKTQDNDGAQRRLASQK 780

  Fly   113 MVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQT--NRHRGFGFVTFQSEDVVDKV 175
            ..|.| ||.|..:.......:|:..|:.||.:....:.....|  :.|||||||.:.|:
  Fly   781 KQTGT-KILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDYMSK------ 838

  Fly   176 CEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYGELVV-WGSSHAHS--------TAA 231
                        .|.|:|      ..|..|.|...||    .||: |.::..:.        |||
  Fly   839 ------------AEAKRA------FDALSASTHLYGR----RLVLEWSANDDNQDVEELRKRTAA 881

  Fly   232 -----TSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQ 263
                 .:|.||.....|.......:|..|...::::|
  Fly   882 KFDGSQAATAAKRSRKSFFDVEGSVQPNQDDDEEEEQ 918

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	31..105	CDD:241020	24/92 (26%)
Rbp6	NP_001097631.1	RRM2_MSI	119..192	CDD:240769	17/74 (23%)
CG3335	NP_648337.1	RRM1_RBM19	2..77	CDD:241008
		RRM_SF	250..314	CDD:302621
		RRM3_RBM19	362..440	CDD:241011
		RRM4_RBM19	552..623	CDD:241013
		RRM	<638..845	CDD:223796	52/218 (24%)
		RRM5_RBM19_like	679..760	CDD:240764	24/81 (30%)
		RRM6_RBM19	785..864	CDD:241015	27/107 (25%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463989
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840