Protein Alignment Rbp6 and lark

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Alignment Length: 204
• Identity: 54/204 - (26%)
• Similarity: 90/204 - (44%)
• Gaps: 43/204 - (21%)

  Fly    28 PG----KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTF-SDPNSVDKVL 87
            ||    |:|||.|..:|....||..|.:||.:.|..|:|:        :|||.. ::....|.:.
  Fly     2 PGAGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQ 58

  Fly    88 TQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFD 152
            ....:.|:...:..:.|..||| |.  |.|.|||||.|:..|...:|:..|:::|.:.:..::
  Fly    59 NLNGYTLNEFAIKVEAAKSRRA-PN--TPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV-- 118

  Fly   153 KQTNRHRGFGFVTFQS-EDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTR-------- 208
                  |.:|||.... .||.|.:     .|:|.::|:   .||.:|.:..:..:.:
  Fly   119 ------RNYGFVHLDCVGDVQDAI-----KELNGRVVD---GQPLKVQVSTSRVRPKPGMGDPEQ 169

  Fly   209 --AAGRSAY 215
              ..|||.:
  Fly   170 CYRCGRSGH 178

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	19/75 (25%)
		RRM2_MSI	119..192	CDD:240769	20/73 (27%)
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	19/72 (26%)
		RRM1_2_CoAA_like	87..152	CDD:409779	22/80 (28%)
		hnRNP-R-Q	<88..>258	CDD:273732	25/107 (23%)