DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and Slirp

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_081234.2 Gene:Slirp / 380773 MGIID:1916394 Length:112 Species:Mus musculus


Alignment Length:79 Identity:22/79 - (27%)
Similarity:36/79 - (45%) Gaps:0/79 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDG 96
            |:..:.|..:...||::|.::|.:....|..|..|...||.|:|.||....:...|.|..|.:||
Mouse    22 FVRKIPWTAAASELREHFAQFGHVRRCTVPFDKETGFHRGMGWVQFSSQEELQNALQQEHHIIDG 86

  Fly    97 KKVDPKVAFPRRAH 110
            .|:..:....:..|
Mouse    87 VKIHVQAQRAKALH 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 21/72 (29%)
RRM2_MSI 119..192 CDD:240769
SlirpNP_081234.2 RRM_SLIRP 21..92 CDD:409688 21/69 (30%)
Blue background indicates that the domain is not in the aligned region.

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