Protein Alignment Rbp6 and TBPH

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_477400.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Alignment Length: 271
• Identity: 67/271 - (24%)
• Similarity: 104/271 - (38%)
• Gaps: 72/271 - (26%)

  Fly    31 MFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELD 95
            :.:.||.|:|:.||||:||..||::..|.:.||..:.:|:|||||.|...::..:||| ..|.:|
  Fly   109 LIVLGLPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLT-NRHLID 172

  Fly    96 GKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRG 160
            |:..:.||...:....::..   |:|||..:.....:|::.||.:||.:.|..:     ....|.
  Fly   173 GRWCEVKVPNSKGMGHQVPC---KVFVGRCTEDINSDDLREYFSKFGEVTDVFI-----PRPFRA 229

  Fly   161 FGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYGELVVWGSSH 225
            |.||||...||...:|. ..|.|....|....|.||
  Fly   230 FSFVTFLDPDVAQSLCG-EDHIIKGVSVHVSNAAPK----------------------------- 264

  Fly   226 AHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQQQQQQQHHQQLHHTHPQ----SPAHS 286
                                        .:|.:.||.|.......:...:|..|||    :|..
  Fly   265 ----------------------------AEQNRNQQVQSYNYNSANSFGMHSYHPQGNHMNPGR- 300

  Fly   287 HAHHPHTHSHS 297
            :.||...:.|:
  Fly   301 NGHHRGNNQHN 311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	30/73 (41%)
		RRM2_MSI	119..192	CDD:240769	22/72 (31%)
TBPH	NP_477400.1	TDP43_N	3..78	CDD:465833
		RRM1_TDP43	108..181	CDD:409760	29/72 (40%)
		RRM2_TDP43	192..261	CDD:409761	22/77 (29%)