Protein Alignment Rbp6 and Srsf10

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: XP_006239282.1
• Gene: Srsf10 / 362630
• RGDID: 1311067
• Length: 262
• Species: Rattus norvegicus
• Alignment Length: 291
• Identity: 62/291 - (21%)
• Similarity: 104/291 - (35%)
• Gaps: 66/291 - (22%)

  Fly    25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
            ||.  .:|:..::..|..|.||..|||||.|.:..|..|..|||.|||.:|.|.|....:..|
  Rat     8 PNT--SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL-- 68

  Fly    90 GTHELD-----GKKVDPKVAFPRRAHPKMVTRTKKIFVG-GLSAPTTLEDVKSYFEQFGPIEDAM 148
              |.||     |::::.:.|...|..|..:    |...| .:.:.:..:|...|      .....
  Rat    69 --HNLDRKWICGRQIEIQFAQGDRKTPNQM----KAKEGRNVYSSSRYDDYDRY------RRSRS 121

  Fly   149 LMFDKQTNRHRGFGF-----------------VTFQSEDVVDKVCEIHFHEINNKMVECK----- 191
            ..::::.:|.|.|.:                 ...:|....|:     |...|......|
  Rat   122 RSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHSDNDR-----FKHRNRSFSRSKSNSRS 181

  Fly   192 --KAQPKEVMLPANLAKTRAAGRSAYGELVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQ 254
              |:|||:.|      |.::..|||         ||..:...:...:.....|.........:::
  Rat   182 RSKSQPKKEM------KAKSRSRSA---------SHTKTRGTSKTDSKTHYKSGSRYEKESRKKE 231

  Fly   255 QQQQQQQQQQQQQQQQHHQQLHHTHPQSPAH 285
            ..:.:.|.:.|.:.:...:....|.|:|..|
  Rat   232 PPRSKSQSRSQSRSRSKSRSRSWTSPKSSGH 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	27/79 (34%)
		RRM2_MSI	119..192	CDD:240769	12/97 (12%)
Srsf10	XP_006239282.1	RRM_SF	5..99	CDD:473069	33/100 (33%)