Protein Alignment Rbp6 and Hrb27C

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_476869.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Alignment Length: 495
• Identity: 124/495 - (25%)
• Similarity: 196/495 - (39%)
• Gaps: 128/495 - (25%)

  Fly    26 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQG 90
            ::.||:|:|||||:|:.|:|..||.|:|||.:.:|||:..:.||||||||||:||.:|:.||..|
  Fly     4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNG 68

  Fly    91 THELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQT 155
            .|.|||:.:|||...||...........|:|:|||.:..|..|::::|.::|.:.:.::|:|::.
  Fly    69 PHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEK 133

  Fly   156 NRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYGEL-- 218
            .:.|||||::|:.|..|:.|....:..:|.|.||.|||:|::.....|...:...|  |||:|
  Fly   134 KKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGG--AYGKLGN 196

  Fly   219 --VVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQQQQQQQHHQQLHHTHPQ 281
              ..||..|                    |..:::|.|
  Fly   197 ECSHWGPHH--------------------APINMMQGQ--------------------------- 214

  Fly   282 SPAHSHAHHPHTHSHSQLLGSLRYTPYPLPAHLSAAAVVVAQQQHHHQQQQQQ------------ 334
                          :.|:.|.      ||...:.|..::...|......||||
  Fly   215 --------------NGQMGGP------PLNMPIGAPNMMPGYQGWGTSPQQQQYGYGNSGPGSYQ 259

  Fly   335 --------QQQQQQQQVVAAQQQHQQQQSLAQVVAAAAGAAPG----------LLPLANPAPPAT 381
                    |....|....|..||.|.........:.:.||..|          .:|..:..|...
  Fly   260 GWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSAGPTGA 324

  Fly   382 PSLLQFAAGQSNAALANSLYADAAAVVGYKRLLAAAAVSSGLRAPTTALGALQAAAANVPAAAAA 446
            |.        :.|..|..:|:            .|.|.::|..:.|..:|.:........|:.:.
  Fly   325 PG--------AGAGTATDMYS------------RAQAWATGGPSTTGPVGGMPRTGPGNSASKSG 369

  Fly   447 AQLQQAQLRQNAALAAAHYPLSELLAMQGGMEMGAGANSA 486
            ::.......     :...|..|..:..:|....|||..||
  Fly   370 SEYDYGGYG-----SGYDYDYSNYVKQEGASNYGAGPRSA 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	42/74 (57%)
		RRM2_MSI	119..192	CDD:240769	24/72 (33%)
Hrb27C	NP_476869.1	RRM1_hnRNPA_hnRNPD_like	9..80	CDD:409763	39/70 (56%)
		RRM2_DAZAP1	94..173	CDD:409765	27/78 (35%)