DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and HNRNPA1

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_112420.1 Gene:HNRNPA1 / 3178 HGNCID:5031 Length:372 Species:Homo sapiens


Alignment Length:5 Identity:4/5 - (80%)
Similarity:5/5 - (100%) Gaps:0/5 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 HPGRE 120
            |||:|
Human   207 HPGQE 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990
RRM2_MSI 119..192 CDD:240769 1/2 (50%)
HNRNPA1NP_112420.1 Globular A domain 4..94
RRM1_hnRNPA1 12..92 CDD:410154
Globular B domain 95..185
RRM2_hnRNPA3 105..184 CDD:409996
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..216 4/5 (80%)
RNA-binding RGG-box 218..240
HnRNPA1 312..344 CDD:463312
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..372
Nuclear targeting sequence (M9) 320..357
Blue background indicates that the domain is not in the aligned region.

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