Protein Alignment Rbp6 and Hnrnpdl

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: XP_063129121.1
• Gene: Hnrnpdl / 305178
• RGDID: 1309950
• Length: 428
• Species: Rattus norvegicus
• Alignment Length: 213
• Identity: 93/213 - (43%)
• Similarity: 117/213 - (54%)
• Gaps: 18/213 - (8%)

  Fly     4 KIEQQQQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRR 68
            ||...:.||              |.||||||||||.||.:.|.:|..|:|::.:..:..||.|.|
  Rat   137 KINASKNQQ--------------DDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGR 187

  Fly    69 SRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLED 133
            |||||||.|.|..||||||....|:||||.:|||    |....|.....||:||||||..|:.|.
  Rat   188 SRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPK----RAKALKGKEPPKKVFVGGLSPDTSEEQ 248

  Fly   134 VKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEV 198
            :|.||..||.||:..|..|.:||..|||.|:|:..|:.|.|:.|..:|:|.:...|.|.||||||
  Rat   249 IKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEV 313

  Fly   199 MLPANLAKTRAAGRSAYG 216
            .......:....|.:|.|
  Rat   314 YRQQQQQQKGGRGAAAGG 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	42/74 (57%)
		RRM2_MSI	119..192	CDD:240769	32/72 (44%)
Hnrnpdl	XP_063129121.1	None