DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and Tial1

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_033409.1 Gene:Tial1 / 21843 MGIID:107913 Length:392 Species:Mus musculus


Alignment Length:196 Identity:50/196 - (25%)
Similarity:90/196 - (45%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SPSEVPNDPGK---MFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPN 81
            :||....|...   :|:|.||.:.:.|.::..|..:|.||:|.|:||..|.:|:|:|||:|.  |
Mouse   102 TPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFY--N 164

  Fly    82 SVD---KVLTQGTHELDGKKVDPKVAFPRRAHPKMV--TRTKK----------------IFVGGL 125
            .:|   .::..|...|.|:::....|..:...||..  |.||:                ::.||:
Mouse   165 KLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGI 229

  Fly   126 SAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQS-EDVVDKVCEIHFHEINNKMVE 189
            ::..|.:.::..|..||.|.:..:..:|      |:.||.|.: |.....:..::...|...:|:
Mouse   230 ASGLTDQLMRQTFSPFGQIMEIRVFPEK------GYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 288

  Fly   190 C 190
            |
Mouse   289 C 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 25/80 (31%)
RRM2_MSI 119..192 CDD:240769 16/89 (18%)
Tial1NP_033409.1 RRM1_TIAR 10..107 CDD:410028 2/4 (50%)
RRM2_TIAR 113..192 CDD:410029 26/80 (33%)
RRM3_TIAR 222..294 CDD:241064 16/74 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 363..392
Blue background indicates that the domain is not in the aligned region.

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