Protein Alignment Rbp6 and hrpa-2

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_741783.1
• Gene: hrpa-2 / 180791
• WormBaseID: WBGene00019249
• Length: 336
• Species: Caenorhabditis elegans
• Alignment Length: 196
• Identity: 63/196 - (32%)
• Similarity: 106/196 - (54%)
• Gaps: 20/196 - (10%)

  Fly     9 QQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFG 73
            :|.||:.:|... .:.|....|:||||||..|:.|.|.:||.::|.:.:|:|::||.|:.|||||
 Worm    51 RQFQQMGMGQYQ-HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFG 114

  Fly    74 FVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVT----RTK-----KIFVGGL-SAP 128
            ||||:...|.:..:....|:|.||.||.|.|.||.....|:.    .|.     |:.:.|: :..
 Worm   115 FVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGV 179

  Fly   129 TTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIH---FHEINNKMVEC 190
            .:::.::.|||.||.::...::     .:.||.|||.::.::..|: |..|   .|.:|.:.:|.
 Worm   180 HSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CLAHNSGRHIVNERKIEV 238

  Fly   191 K 191
            :
 Worm   239 R 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	35/74 (47%)
		RRM2_MSI	119..192	CDD:240769	18/77 (23%)
hrpa-2	NP_741783.1	RRM_SF	71..148	CDD:473069	36/76 (47%)
		PABP-1234	72..>244	CDD:130689	57/174 (33%)