Protein Alignment Rbp6 and Ncl

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_035010.3
• Gene: Ncl / 17975
• MGIID: 97286
• Length: 707
• Species: Mus musculus
• Alignment Length: 222
• Identity: 59/222 - (26%)
• Similarity: 94/222 - (42%)
• Gaps: 41/222 - (18%)

  Fly     8 QQQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTT--RRSR 70
            ::.|:|...|  ..|....:...:.:..||:..:.|:|.:.|      .:|..:|.|..  .:.:
Mouse   468 EKGQRQERTG--KTSTWSGESKTLVLSNLSYSATKETLEEVF------EKATFIKVPQNPHGKPK 524

  Fly    71 GFGFVTFSD-------PNSVDKVLTQGTH---ELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGL 125
            |:.|:.|:.       .||.:|:..:|..   ||.|..        .|:.|     :|.:||.||
Mouse   525 GYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGSN--------SRSQP-----SKTLFVKGL 576

  Fly   126 SAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE-IHFHEINNKMVE 189
            |..||.|.:|..||  |.:. |.::.|::|...:|||||.|.||:......| :...||:...|.
Mouse   577 SEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVT 638

  Fly   190 CKKAQPKEVMLPANLAKTRAAGRSAYG 216
            ...|:||    .......|..||..:|
Mouse   639 LDWAKPK----GEGGFGGRGGGRGGFG 661

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	18/86 (21%)
		RRM2_MSI	119..192	CDD:240769	27/73 (37%)
Ncl	NP_035010.3	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..308
		PRK13808	<12..142	CDD:172341
		8 X 8 AA tandem repeats of X-T-P-X-K-K-X-X	58..135
		RRM1_NCL	309..383	CDD:409837
		RRM2_NCL	392..467	CDD:409838
		RRM3_NCL	486..558	CDD:409839	15/77 (19%)
		RRM4_NCL	569..646	CDD:409840	31/83 (37%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	639..707		7/27 (26%)