Sequence 1: | NP_001097631.1 | Gene: | Rbp6 / 39919 | FlyBaseID: | FBgn0260943 | Length: | 499 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032655.1 | Gene: | Msi1 / 17690 | MGIID: | 107376 | Length: | 362 | Species: | Mus musculus |
Alignment Length: | 424 | Identity: | 186/424 - (43%) |
---|---|---|---|
Similarity: | 224/424 - (52%) | Gaps: | 96/424 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 GPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPN 81
Fly 82 SVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIED 146
Fly 147 AMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAA- 210
Fly 211 ---GRSAY----GELVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQQQQQ 268
Fly 269 QQHHQQLHHTHPQSPAHSHAHHPHTHSHSQLLGSLRYTPY-PLPAHLSAAAVVVAQQQHHHQQQQ 332
Fly 333 QQQQQQQQQQVVAAQQQHQQQQSLAQVVAAAAGAAPGLLPLANPAPPATPSLLQFAAGQSNAALA 397
Fly 398 NSLYADAAAVVGYKRLLAAAAVSSGLRAPTTALG 431 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rbp6 | NP_001097631.1 | RRM1_MSI | 31..105 | CDD:241020 | 49/73 (67%) |
RRM2_MSI | 119..192 | CDD:240769 | 61/72 (85%) | ||
Msi1 | NP_032655.1 | RRM1_MSI | 22..96 | CDD:241020 | 49/73 (67%) |
PABP-1234 | <32..312 | CDD:130689 | 159/360 (44%) | ||
RRM2_MSI | 110..183 | CDD:240769 | 61/72 (85%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 124 | 1.000 | Domainoid score | I5498 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 367 | 1.000 | Inparanoid score | I2137 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1565323at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000417 | |
OrthoInspector | 1 | 1.000 | - | - | otm44313 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101082 | |
Panther | 1 | 1.100 | - | - | O | PTHR48032 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1869 |
SonicParanoid | 1 | 1.000 | - | - | X310 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.860 |