Protein Alignment Rbp6 and tiar-2

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_496718.1
• Gene: tiar-2 / 174909
• WormBaseID: WBGene00012904
• Length: 434
• Species: Caenorhabditis elegans
• Alignment Length: 246
• Identity: 47/246 - (19%)
• Similarity: 101/246 - (41%)
• Gaps: 67/246 - (27%)

  Fly    25 PNDPGK------------MFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTF 77
            |.:||:            :|:|.|..:.....||:.|.::|::|||.:::|..|.:.:|:|||::
 Worm   116 PREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180

  Fly    78 SDPNSVDKVLTQ---------------GTHELD------GKKVDPKVAFPRR-----AHPKMVTR 116
            ......::.:.:               .|.:.|      |.:.|      ||     ...:...:
 Worm   181 PRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGD------RRGGGGGGRDRYHNQ 239

  Fly   117 TKK---------------IFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTF 166
            ::|               ::||.: |....::::..|::||||.:.      :|.:.:|:.||.|
 Worm   240 SEKTYDEIFNQAAADNTSVYVGNI-ANLGEDEIRRAFDRFGPINEV------RTFKIQGYAFVKF 297

  Fly   167 QS-EDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLAKTRAAGRSAYG 216
            :: |.....:.:::..:|..::|.|...:..:...|:........|...||
 Worm   298 ETKESAARAIVQMNNADIGGQIVRCSWGKSGDSGKPSERGSGGGGGSGNYG 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	20/107 (19%)
		RRM2_MSI	119..192	CDD:240769	18/88 (20%)
tiar-2	NP_496718.1	PABP-1234	41..>317	CDD:130689	41/213 (19%)
		RRM_SF	133..207	CDD:473069	16/73 (22%)
		RRM3_TIA1_like	256..325	CDD:409790	17/75 (23%)