Protein Alignment Rbp6 and rsp-2

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_496441.1
• Gene: rsp-2 / 174747
• WormBaseID: WBGene00004699
• Length: 281
• Species: Caenorhabditis elegans
• Alignment Length: 220
• Identity: 45/220 - (20%)
• Similarity: 91/220 - (41%)
• Gaps: 52/220 - (23%)

  Fly    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHEL 94
            :::||.|..:.|...:..:|..||.:|: ::||:       |||||.|.|....|    ...|:|
 Worm     3 RVYIGRLPNRASDRDVEHFFRGYGKLSD-VIMKN-------GFGFVDFQDQRDAD----DAVHDL 55

  Fly    95 DGKKVDPK---VAFPRR------------------------------AHPKMVTRTKKIFVGGLS 126
            :||::..:   :.||||                              .:.:..:...::.:..||
 Worm    56 NGKELCGERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDNLS 120

  Fly   127 APTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQS-EDVVDKVCEIHFHEINNKMVEC 190
            ...:.:|:|.:..:.| ||..   :.:...|:.....|.|.| :|:.|.:.::...::|.:.::|
 Worm   121 TRYSWQDIKDHIRKLG-IEPT---YSEAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLKC 181

  Fly   191 --KKAQPKEVMLPANLAKTRAAGRS 213
              :.........|...:::|:..||
 Worm   182 TDETRDRSRSRSPRRRSRSRSPTRS 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	22/77 (29%)
		RRM2_MSI	119..192	CDD:240769	15/75 (20%)
rsp-2	NP_496441.1	RRM1_SRSF4_like	3..72	CDD:409774	24/80 (30%)
		RRM2_SRSF1_4_like	112..181	CDD:409776	14/72 (19%)