Protein Alignment Rbp6 and tiar-1

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: NP_495121.1
• Gene: tiar-1 / 173967
• WormBaseID: WBGene00015943
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 360
• Identity: 68/360 - (18%)
• Similarity: 136/360 - (37%)
• Gaps: 102/360 - (28%)

  Fly     5 IEQQQQQQQVELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRS 69
            :|..|||.:::         ......:|:|.||.:...:.||:.|..:||:|:|.|::|..|.:|
 Worm   120 VEPGQQQSKID---------TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKS 175

  Fly    70 RGFGFVTFSDPNSVDKVLTQGTHELDGKKV-------------DPKVAFPRRAHPKMVTRTK--- 118
            :|:|||::......::.:.|...:..|::.             :....:..:::.::..:|.
 Worm   176 KGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN 240

  Fly   119 -KIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIHFH 181
             .::||.: |..|.::::..|..||.|.:..:.      :.:|:.||.|.::|...| :.:::..
 Worm   241 TSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQMNNQ 298

  Fly   182 EINNKMVECKKAQPKEVMLPANLAKTRAAGRS-------AYGELVVWGSSHAHSTAATSAAAAGL 239
            ::..::|.|            :..||...|::       .||.....|:|..:|......|..|.
 Worm   299 DVGGQLVRC------------SWGKTGDTGKTPGGSYGYGYGNSSSGGNSQPYSGYGGGGAYGGG 351

  Fly   240 LPSSLAAAASVLQQQQQQQQQQQQQQQQQQQHHQQLHHTHPQSPAHSHAHHPHTHSHSQLLGSLR 304
            ..........         |||.....|..|::.| ::.:||
 Worm   352 QGGGGHGGPG---------QQQSNANSQYWQYYAQ-YYNNPQ----------------------- 383

  Fly   305 YTPYPLPAHLSAAAVVVAQQQHHHQQQQQQQQQQQ 339
                            :.||..::.|||....|||
 Worm   384 ----------------LMQQWSNYWQQQGGAPQQQ 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	21/87 (24%)
		RRM2_MSI	119..192	CDD:240769	16/73 (22%)
tiar-1	NP_495121.1	PABP-1234	47..>302	CDD:130689	40/197 (20%)
		RRM2_TIA1_like	136..210	CDD:409789	21/73 (29%)