DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and DAZ1

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_004072.3 Gene:DAZ1 / 1617 HGNCID:2682 Length:744 Species:Homo sapiens


Alignment Length:506 Identity:105/506 - (20%)
Similarity:166/506 - (32%) Gaps:157/506 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTH 92
            |..:|:||:..:.....:...|||||.:.|..::.: .|..|:|:|||:|.:...|.|::....|
Human   204 PNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIVGSQIH 267

  Fly    93 ELDGKKVD------------------PKVAFP--------------------------------- 106
             ..|||:.                  |.|..|                                 
Human   268 -FHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQ 331

  Fly   107 RRAHP-----------------------------KMVTRTKKIFVGGLSAPTTLEDVKSYFEQFG 142
            ..|:|                             |:|..|  :||||:.|.....::.|.|.::|
Human   332 SAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNT--VFVGGIDARMDETEIGSCFGRYG 394

  Fly   143 PIEDAMLMFDKQTNR---HRGFGFVTFQSEDVVDKV--CEIHFHEINNKMVECKKAQPKEVMLPA 202
            .:::..::    |||   .:|:|||:|.::..|.|:  .:||||             .|::.|..
Human   395 SVKEVKII----TNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFH-------------GKKLKLGP 442

  Fly   203 NLAKTRAAGRSAYGELVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQQQQ 267
            .:.|.:...|......:|                  :.|.......:|.:....:...|.|....
Human   443 AIRKQKLCARHVQPRPLV------------------VNPPPPPQFQNVWRNPNTETYLQPQITPN 489

  Fly   268 QQQHHQQLHHTHPQSPAHSHAHHPHTHSHSQLLGSLRYTPYPLPAHLSAAAVVVAQQQHHHQQQQ 332
            ....|.|.:..:|.||.       ...:..||| ...|..||.... ||..|....|...:..|.
Human   490 PVTQHVQAYSAYPHSPG-------QVITGCQLL-VYNYQEYPTYPD-SAFQVTTGYQLPVYNYQP 545

  Fly   333 QQQQQQQQQQVVAAQQ-QHQQQQSLAQVVAAAAGAAPGL-LPLAN----PAPPATPSLLQFAAG- 390
            .....:...||.|..| .....|:......:....|.|. .|:.|    ||.|::|  .|..|| 
Human   546 FPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQPFPAYPSSP--FQVTAGY 608

  Fly   391 -------QSNAALANSLYADAAA----VVGYKRLLA----AAAVSSGLRAP 426
                   |:..|..||.:..|..    |..|:...|    ...|::|.:.|
Human   609 QLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLP 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 24/92 (26%)
RRM2_MSI 119..192 CDD:240769 22/77 (29%)
DAZ1NP_004072.3 RRM_DAZL 35..116 CDD:410073
PABP-1234 42..603 CDD:130689 91/448 (20%)
RRM_DAZL 200..281 CDD:410073 23/78 (29%)
RRM_DAZL 365..446 CDD:410073 27/99 (27%)
Daz 596..616 CDD:465893 6/21 (29%)
Daz 620..640 CDD:465893 5/19 (26%)
Daz 644..664 CDD:465893 4/16 (25%)
Daz 668..688 CDD:465893
Daz 692..712 CDD:465893
Blue background indicates that the domain is not in the aligned region.

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