Protein Alignment Rbp6 and B52

DIOPT Version :10

• Sequence 1: NP_001097631.1
• Gene: Rbp6 / 39919
• FlyBaseID: FBgn0260943
• Length: 499
• Species: Drosophila melanogaster
• Sequence 2: XP_003436860.1
• Gene: B52 / 1275942
• VectorBaseID: AGAMI1_007388
• Length: 351
• Species: Anopheles gambiae
• Alignment Length: 338
• Identity: 56/338 - (16%)
• Similarity: 117/338 - (34%)
• Gaps: 93/338 - (27%)

  Fly    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHEL 94
            ::::|||.:......|..:|..||...:.::        ..|:|||.|.|....|    ...:||
Mosquito     5 RVYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDAD----DAVYEL 57

  Fly    95 DGKK-------VDPKVAFPR-------------------------------RAHPKMVTRTK-KI 120
            :||:       |:|.....|                               |..|.:  ||: ::
Mosquito    58 NGKELLGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPL--RTEYRL 120

  Fly   121 FVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQS-EDVVDKVCEIHFHEIN 184
            .|..||...:.:|:|.|..|.|.:..|    |....| :..|.|.|.: .|:...:.::...|:|
Mosquito   121 VVENLSTRVSWQDLKDYMRQAGEVTYA----DAHKQR-KNEGVVEFATLSDMKTAIEKLDDTELN 180

  Fly   185 NKMVEC-----------------------------KKAQPKEVMLPANLAKTRAAGRSAYGELVV 220
            .:.:..                             .:::.:......:.:|:|:..:|..|
Mosquito   181 GRRIRLVEDRGRNGRNGRGRSRSSSSRSRSRSRRRSRSRSRSRRSSRSRSKSRSRSKSKNG---- 241

  Fly   221 WGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQQQQQQQQQQQQQQQQQHHQQLHHTHPQSPAH 285
             ..|...|.:.:.:..:.....|.:.:.|..:.:.:.:.:.:.:.:...:...:......:|.:.
Mosquito   242 -SKSPEKSRSRSRSVKSRDNSKSKSRSRSPKRDRDESRSRSRSRSKSHSRSRSKSKDNKSRSRSR 305

  Fly   286 SHAHHPHTHSHSQ 298
            |.:..|.:||.|:
Mosquito   306 SRSRSPRSHSRSR 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp6	NP_001097631.1	RRM1_MSI	30..105	CDD:409990	20/81 (25%)
		RRM2_MSI	119..192	CDD:240769	17/102 (17%)
B52	XP_003436860.1	RRM1_SRSF4_like	5..74	CDD:409774	20/80 (25%)
		RRM2_SRSF4_like	118..189	CDD:410012	17/75 (23%)