DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbp6 and SRSF10

DIOPT Version :10

Sequence 1:NP_001097631.1 Gene:Rbp6 / 39919 FlyBaseID:FBgn0260943 Length:499 Species:Drosophila melanogaster
Sequence 2:NP_473357.1 Gene:SRSF10 / 10772 HGNCID:16713 Length:262 Species:Homo sapiens


Alignment Length:291 Identity:62/291 - (21%)
Similarity:104/291 - (35%) Gaps:66/291 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
            ||.  .:|:..::..|..|.||..|||||.|.:..|..|..|||.|||.:|.|.|....:..|  
Human     8 PNT--SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL-- 68

  Fly    90 GTHELD-----GKKVDPKVAFPRRAHPKMVTRTKKIFVG-GLSAPTTLEDVKSYFEQFGPIEDAM 148
              |.||     |::::.:.|...|..|..:    |...| .:.:.:..:|...|      .....
Human    69 --HNLDRKWICGRQIEIQFAQGDRKTPNQM----KAKEGRNVYSSSRYDDYDRY------RRSRS 121

  Fly   149 LMFDKQTNRHRGFGF-----------------VTFQSEDVVDKVCEIHFHEINNKMVECK----- 191
            ..::::.:|.|.|.:                 ...:|....|:     |...|......|     
Human   122 RSYERRRSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHSDNDR-----FKHRNRSFSRSKSNSRS 181

  Fly   192 --KAQPKEVMLPANLAKTRAAGRSAYGELVVWGSSHAHSTAATSAAAAGLLPSSLAAAASVLQQQ 254
              |:|||:.|      |.::..|||         ||..:...:...:.....|.........:::
Human   182 RSKSQPKKEM------KAKSRSRSA---------SHTKTRGTSKTDSKTHYKSGSRYEKESRKKE 231

  Fly   255 QQQQQQQQQQQQQQQQHHQQLHHTHPQSPAH 285
            ..:.:.|.:.|.:.:...:....|.|:|..|
Human   232 PPRSKSQSRSQSRSRSKSRSRSWTSPKSSGH 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbp6NP_001097631.1 RRM1_MSI 30..105 CDD:409990 27/79 (34%)
RRM2_MSI 119..192 CDD:240769 12/97 (12%)
SRSF10NP_473357.1 RRM_SF 5..99 CDD:473069 33/100 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..262 26/171 (15%)

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