DRSC/TRiP Functional Genomics Resources

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Protein Alignment rogdi and Rogdi

DIOPT Version :10

Sequence 1:NP_730244.1 Gene:rogdi / 39917 FlyBaseID:FBgn0036697 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_573448.2 Gene:Rogdi / 66049 MGIID:1913299 Length:287 Species:Mus musculus


Alignment Length:279 Identity:107/279 - (38%)
Similarity:153/279 - (54%) Gaps:31/279 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LADTEREEALNLQIEFEWVLRQEVHAILKQLRSILVECAHRFPVPLYENEG-KKTEKFIL-TVSP 141
            :|.:..|.|: |:.||.|:|..||||:|:||:.||.|.:.||.:|....|| .|.|.||| :...
Mouse     5 MAASAAERAV-LEEEFRWLLHAEVHAVLRQLQDILKEASLRFTLPGPSTEGPAKQENFILGSCGT 68

  Fly   142 DQLKAVLTLTGDAITQADISFKLCKAPSQTQRTSITHDSPWKLQQVQDAANHLQTAINHIDDVDD 206
            ||:|..|||.|||::|||::.|:.: .:|....:...|..|||||:|||.||:..||..:.:.|:
Mouse    69 DQVKGTLTLQGDALSQADVNLKMPR-NNQLLHLAFREDKQWKLQQIQDARNHVSQAIYLLANRDE 132

  Fly   207 SYHFKTSDEVLHVIGNILDALQRGRNSLLVPKKKPIDELIKGRNMKSLVPNLPEDLAVSFYLQSH 271
            ||.|||..|||.::..::..|.|.|:.|..|....:.|:......:...|.||.||.|:.|:..:
Mouse   133 SYQFKTGAEVLKLMDAVMLQLTRARSRLTTPATLTLPEIAASGLTRMFAPTLPSDLLVNVYINLN 197

  Fly   272 KLIIAVYQL------------------LNNQGTM-RFDSRQAEAS--------VQWLNDVLLLLM 309
            ||.:.||||                  |::.|.| .:.|::.|.|        :.||||.|:...
Mouse   198 KLCLTVYQLHALQPTSTKNFRPAGGAVLHSPGAMFEWGSQRLEVSHVHKVECVIPWLNDALVYFT 262

  Fly   310 NGQKLCQQLKDKISVFSVY 328
            ...:|||||||||:|||.|
Mouse   263 VSLQLCQQLKDKIAVFSSY 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rogdiNP_730244.1 Rogdi_lz 93..>280 CDD:463031 77/188 (41%)
RogdiNP_573448.2 Rogdi_lz 18..276 CDD:463031 98/258 (38%)

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