DRSC/TRiP Functional Genomics Resources

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Protein Alignment rogdi and rogdi

DIOPT Version :9

Sequence 1:NP_730244.1 Gene:rogdi / 39917 FlyBaseID:FBgn0036697 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_956257.1 Gene:rogdi / 335642 ZFINID:ZDB-GENE-030131-7582 Length:284 Species:Danio rerio


Alignment Length:283 Identity:117/283 - (41%)
Similarity:158/283 - (55%) Gaps:31/283 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 MLADTEREEALNLQIEFEWVLRQEVHAILKQLRSILVECAHRFPVPLYENEGK-KTEKFILTVSP 141
            |.|.::.|..: |:.||.|:|::||||:||||:.||.|.:.|..:|....||: |.|.|||..|.
Zfish     1 MTAASQAERTV-LEEEFNWLLKEEVHAVLKQLQDILKEASRRLSMPSPGLEGQLKQENFILGSST 64

  Fly   142 -DQLKAVLTLTGDAITQADISFKLCKAPSQTQRTSITHDSPWKLQQVQDAANHLQTAINHIDDVD 205
             ||:|.||||.|:|:|||||:.|:.|: ||....:...|..|||||:|||.||:..|:..:...|
Zfish    65 MDQVKGVLTLQGEALTQADINIKVAKS-SQVMHFAFRDDKQWKLQQIQDARNHVNQALQLLSSRD 128

  Fly   206 DSYHFKTSDEVLHVIGNILDALQRGRNSLLVPKKKPIDELIKGRNMKSLVPNLPEDLAVSFYLQS 270
            |||||||..||..::..|:..|.|.||.|..|....:.||.....||...|.:|.|:.|:||:..
Zfish   129 DSYHFKTGAEVNKLMDAIMLQLTRARNRLTTPASMTLPELAASGLMKMFTPPMPGDVMVNFYINL 193

  Fly   271 HKLIIAVYQL------------------LNNQGTM------RFD---SRQAEASVQWLNDVLLLL 308
            .||.:.||||                  |:|.|.|      :|:   ..:.|..|.||||.|:..
Zfish   194 SKLCLTVYQLHVLQPNTTKNFKPAGSSVLHNPGAMFEHNNTKFEVSHVHKVECVVPWLNDTLVFF 258

  Fly   309 MNGQKLCQQLKDKISVFSVYKDF 331
            ....:|||||||||||||.:.::
Zfish   259 TISLQLCQQLKDKISVFSSFWNY 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rogdiNP_730244.1 Rogdi_lz 93..>280 CDD:287261 86/188 (46%)
rogdiNP_956257.1 Rogdi_lz 15..273 CDD:287261 113/269 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580316
Domainoid 1 1.000 157 1.000 Domainoid score I4129
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11605
Inparanoid 1 1.050 186 1.000 Inparanoid score I3923
OMA 1 1.010 - - QHG46596
OrthoDB 1 1.010 - - D1051737at2759
OrthoFinder 1 1.000 - - FOG0007220
OrthoInspector 1 1.000 - - oto39488
orthoMCL 1 0.900 - - OOG6_107253
Panther 1 1.100 - - LDO PTHR13618
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2769
SonicParanoid 1 1.000 - - X6095
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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