DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and CML23

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_564874.1 Gene:CML23 / 842958 AraportID:AT1G66400 Length:157 Species:Arabidopsis thaliana


Alignment Length:139 Identity:44/139 - (31%)
Similarity:77/139 - (55%) Gaps:5/139 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQLAAKFI 80
            ::|.|..||....|.|..:.:.|::..:.....::..:.:::|.|.|.:|.::..|||.|   |.
plant    16 IKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDEFVAL---FQ 77

  Fly    81 VEEDA--EAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLTEQELDIMIEEIDSDGSGTV 143
            :.:.:  .:..::|:|||.|||...||.|....|..::|.|.::.:.|:...||.::||||.|.|
plant    78 ISDQSSNNSAIRDLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCV 142

  Fly   144 DFDEFMEMM 152
            ||:||.:||
plant   143 DFEEFKKMM 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 44/139 (32%)
CML23NP_564874.1 PTZ00184 13..152 CDD:185504 44/139 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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