DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC73F and AT4G03290

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_192238.1 Gene:AT4G03290 / 827993 AraportID:AT4G03290 Length:154 Species:Arabidopsis thaliana


Alignment Length:139 Identity:43/139 - (30%)
Similarity:78/139 - (56%) Gaps:2/139 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQLAAKFI 80
            |.:.|..||....|.|.|:.:.:..:.:|....:..|.::|:::|.:..|.::..||.:|....:
plant     6 LNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIEEFGELYKTIM 70

  Fly    81 VEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKE--LDDQLTEQELDIMIEEIDSDGSGTV 143
            ||::.|..:::::|||.::|:.|:|||....||.:|..  |....|.:|...||.::|.||.|.|
plant    71 VEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRKMIMQVDVDGDGRV 135

  Fly   144 DFDEFMEMM 152
            ::.||.:||
plant   136 NYMEFRQMM 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 43/139 (31%)
AT4G03290NP_192238.1 PTZ00184 5..144 CDD:185504 41/137 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.