DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and CML42

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_193810.1 Gene:CML42 / 827826 AraportID:AT4G20780 Length:191 Species:Arabidopsis thaliana


Alignment Length:156 Identity:47/156 - (30%)
Similarity:72/156 - (46%) Gaps:21/156 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQL----- 75
            ||:.|:.||....|.|..|.::..|..:|...|...|:..:|...:..:..|.|.:|..|     
plant    30 LQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSLHKTLD 94

  Fly    76 ------AAKFIVEED----AEAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLTE----Q 126
                  |......||    |...:.:|.|||:::|:.|:|||....|:.:||:|.  |.|    :
plant    95 DSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVLKKLG--LPEGGEME 157

  Fly   127 ELDIMIEEIDSDGSGTVDFDEFMEMM 152
            .::.||..:|.:..|.|||.||..||
plant   158 RVEKMIVSVDRNQDGRVDFFEFKNMM 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 47/156 (30%)
CML42NP_193810.1 PTZ00184 34..183 CDD:185504 43/150 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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