DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and AT3G18430

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001189924.1 Gene:AT3G18430 / 821372 AraportID:AT3G18430 Length:175 Species:Arabidopsis thaliana


Alignment Length:146 Identity:29/146 - (19%)
Similarity:65/146 - (44%) Gaps:17/146 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQL 75
            ::|..|.:.|...|....|.|..:....:......|..::    |::.||     .|.|.:||..
plant    27 QEILSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQR----LLKMVD-----GLNFKDFVAF 82

  Fly    76 AAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKEL-----DDQLTEQELDIMIEEI 135
            .:.|..:   .:::::::..|::||...||.:....:.|:|::|     .|:..||.|..:::|.
plant    83 LSAFSAK---ASLRQKVQLIFKVYDSDCNGKVSFKDIMEVLRDLSGSFMSDEQREQVLSQVLKES 144

  Fly   136 DSDGSGTVDFDEFMEM 151
            .......:..::|:::
plant   145 GYTSDSFLTLEDFIKI 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 29/146 (20%)
AT3G18430NP_001189924.1 FRQ1 24..161 CDD:227455 29/146 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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