DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and MSS3

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_565996.1 Gene:MSS3 / 818931 AraportID:AT2G43290 Length:215 Species:Arabidopsis thaliana


Alignment Length:143 Identity:44/143 - (30%)
Similarity:76/143 - (53%) Gaps:4/143 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQLAAKFI 80
            |::.|..||....|.|..|.:.|.|..:|.....|.|.::|.::|.:..|.::..||..|.:..:
plant    66 LKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIV 130

  Fly    81 VE--EDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKE--LDDQLTEQELDIMIEEIDSDGSG 141
            .|  .|.|..::::::||.::|:.|:|||....||.::..  |....|......||.::|:||.|
plant   131 DEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDG 195

  Fly   142 TVDFDEFMEMMTG 154
            .|::.||::||.|
plant   196 RVNYKEFLQMMKG 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 42/140 (30%)
MSS3NP_565996.1 PTZ00184 64..206 CDD:185504 41/139 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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