DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and hpcal1

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_031757604.1 Gene:hpcal1 / 733484 XenbaseID:XB-GENE-947040 Length:258 Species:Xenopus tropicalis


Alignment Length:182 Identity:37/182 - (20%)
Similarity:72/182 - (39%) Gaps:41/182 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVDEDLTPEQIAVLQKAFNSFDHQ------------KTGSIPTEMVADILRLMGQPFD----K 49
            |...:..|.||.:..|::.....||:            .||.:..|   :..::....|.    .
 Frog     1 MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFLKDCPTGHLTVE---EFKKIYANFFPYGDAS 62

  Fly    50 KILEELIEEVDEDKSGRLEFGEFVQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKE 114
            |..|.:....|.:..|.::|.||:  .|..:....  .::::|:.||.:||..|||:|....:.|
 Frog    63 KFAEHVFRTFDTNGDGTIDFREFI--IALSVTSRG--KLEQKLKWAFSMYDLDGNGYISRGEMLE 123

  Fly   115 ILKEL------------DDQLTEQELDIMIEEIDSDGSGTVDFDEFMEMMTG 154
            |::.:            |:...|:..|.:.:::|::.      |.....:||
 Frog   124 IVQAIYKMVSSVMKMPEDESTPEKRTDKIFKQMDTNN------DALSYYVTG 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 34/174 (20%)
hpcal1XP_031757604.1 FRQ1 13..162 CDD:227455 30/161 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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