DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and phf24

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_021334985.1 Gene:phf24 / 558943 ZFINID:ZDB-GENE-091204-154 Length:421 Species:Danio rerio


Alignment Length:162 Identity:36/162 - (22%)
Similarity:60/162 - (37%) Gaps:50/162 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTPEQIAVLQKAFNSFDHQKTGSIPTE-MVADILR-----LMGQPFDKKILEELIEEV------- 59
            ||.|::..|.:.|     ::...||.. :|:|.|.     :..|.|::.:.:|..|||       
Zfish   205 LTEEEMYSLMETF-----KQCKIIPESCLVSDELLQYRHFVTKQLFERDLTDEEEEEVLAQFAAL 264

  Fly    60 DEDKSGRLEFGEFVQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLT 124
            |.:|.|::|:.:       |:..|....:||               |.....|..|       ||
Zfish   265 DPEKKGQIEWSD-------FLYHETLSVLQK---------------FRTENSLVRI-------LT 300

  Fly   125 EQELD---IMIEEIDSDGSGTVDFDEFMEMMT 153
            .:|.|   .:.:.||.|....:...|..:..|
Zfish   301 AKERDRARALFQSIDQDKDAIITAGEARKAQT 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 35/160 (22%)
phf24XP_021334985.1 Zf_RING 136..208 CDD:293349 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582457
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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