DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and cib1

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001011480.1 Gene:cib1 / 496971 XenbaseID:XB-GENE-970951 Length:190 Species:Xenopus tropicalis


Alignment Length:161 Identity:38/161 - (23%)
Similarity:77/161 - (47%) Gaps:20/161 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTPEQIAVLQKAFNSFDHQKTGS------IPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGR 66
            ||.::|.:..|.|:....:...|      ||.|...::..|...||:.:|.  .:....|.:.|.
 Frog    22 LTKQEIILAYKRFSEVAQKDNRSNIESLRIPKERFLNLPELKANPFNDRIC--TVFSTSEQEDGS 84

  Fly    67 LEFGEFVQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKEL-----DDQLTEQ 126
            :.|.:|:.:.:.|   .::..::.:...|||::|..|:|.:..:.|:.::.:|     |.:|:..
 Frog    85 MSFEDFLDMLSAF---SESATLEVKSHYAFRIFDFDGDGALNESDLEHLVNKLTGDKDDTKLSNS 146

  Fly   127 ELDIMI----EEIDSDGSGTVDFDEFMEMMT 153
            |:..:|    ||.|.|..||::..||..:::
 Frog   147 EMRQLIANILEESDIDKDGTINHSEFQHVIS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 38/159 (24%)
cib1NP_001011480.1 FRQ1 20..181 CDD:227455 38/161 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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