DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC73F and CG17770

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_651432.1 Gene:CG17770 / 43118 FlyBaseID:FBgn0039374 Length:164 Species:Drosophila melanogaster


Alignment Length:148 Identity:49/148 - (33%)
Similarity:85/148 - (57%) Gaps:5/148 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DLTPEQIAVLQKAFNSFDHQKTGSIP-TEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFG 70
            :||.||:..|:.||:.||.|.|..|| |.:...:|.:...|.|.: |:|:..|:|.|.||.|...
  Fly    19 NLTEEQVKDLEIAFSLFDDQDTKVIPITNLRQLMLSVAHYPSDME-LQEIQAEIDADGSGELYLS 82

  Fly    71 EFVQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLTEQELDIMIEEI 135
            :|:.:.::.......|   .|:..|||::||:|.|.|..:..:.|::.:.:|||:.|::.:|.:.
  Fly    83 DFLHIMSQRYANMSTE---DEIIAAFRVFDKEGTGLISESEFRHIMQNMGEQLTDDEVEEIIRDA 144

  Fly   136 DSDGSGTVDFDEFMEMMT 153
            :||..|.:|:..|:.||:
  Fly   145 NSDLEGNIDYVRFVRMMS 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 48/146 (33%)
CG17770NP_651432.1 PTZ00184 19..161 CDD:185504 47/145 (32%)
EFh 27..89 CDD:298682 22/62 (35%)
EFh 63..126 CDD:238008 20/66 (30%)
EFh 100..162 CDD:238008 21/61 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23050
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.