DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and Efcab6

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_038936237.1 Gene:Efcab6 / 315179 RGDID:1309065 Length:1509 Species:Rattus norvegicus


Alignment Length:169 Identity:27/169 - (15%)
Similarity:63/169 - (37%) Gaps:35/169 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEFVQLAAKFI 80
            |.|.....|..|.|||.......::........::..::|:.:.|...:|:..:.:|:|.....:
  Rat  1336 LLKECKEKDTDKQGSITAAEFLALIEKFKLDISREESQQLLVKYDMKNNGKFAYCDFIQSCVLLL 1400

  Fly    81 VEEDAEAMQ-----------------------------------KELREAFRLYDKQGNGFIPTT 110
            ..::...|:                                   :.:|..|:.||:.|.|.:...
  Rat  1401 KAKETSLMRRMRIQNADKMKEAGVETPSFYSALLRIQPKIVHCWRPMRRTFKTYDENGTGLLSVA 1465

  Fly   111 CLKEILKELDDQLTEQELDIMIEEIDSDGSGTVDFDEFM 149
            ..:::|::....|:|:|...::|..|...|..:.:::|:
  Rat  1466 DFRKVLRQFSINLSEEEFFHVLEYYDKSLSSKISYNDFL 1504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 27/169 (16%)
Efcab6XP_038936237.1 FRQ1 82..264 CDD:227455
EFh_parvalbumin_like <420..490 CDD:330177
EF-hand motif 429..457 CDD:319994
EF-hand motif 465..490 CDD:319994
EFh_PI-PLC 869..980 CDD:333715
EF-hand motif 869..897 CDD:320029
EF-hand_7 873..927 CDD:404394
EF-hand motif 904..929 CDD:320029
FRQ1 1086..1247 CDD:227455
EF-hand_11 1170..1274 CDD:401068
PTZ00183 1335..1505 CDD:185503 27/169 (16%)
EF-hand_7 1447..1507 CDD:404394 14/58 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342443
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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