DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and Calml3

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001012054.1 Gene:Calml3 / 307100 RGDID:1305499 Length:149 Species:Rattus norvegicus


Alignment Length:148 Identity:53/148 - (35%)
Similarity:100/148 - (67%) Gaps:3/148 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSGRLEFGEF 72
            ||.||||..::||:.||....|.|.|:.:..::|.:||...:..|::::.|:|:|.:|.::|.||
  Rat     5 LTEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEF 69

  Fly    73 VQLAAKFIVEEDAEAMQKELREAFRLYDKQGNGFIPTTCLKEILKELDDQLTEQELDIMIEEIDS 137
            :.:.::.:.:.|:|   :|:|||||::||.||||:....|:.::..|.::|:::|:|.||:..|:
  Rat    70 LTMMSRKMKDTDSE---EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADT 131

  Fly   138 DGSGTVDFDEFMEMMTGE 155
            ||.|.|:::||:.|:..:
  Rat   132 DGDGQVNYEEFVHMLVSK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 53/144 (37%)
Calml3NP_001012054.1 PTZ00184 1..149 CDD:185504 53/146 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23050
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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