DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and Efcab2

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_038946462.1 Gene:Efcab2 / 289280 RGDID:1308593 Length:179 Species:Rattus norvegicus


Alignment Length:172 Identity:36/172 - (20%)
Similarity:79/172 - (45%) Gaps:27/172 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DEDLTPEQIAVLQK----AFNSFDHQKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDK-S 64
            |.:.|...:|.|.|    ||..|||:...::....:..|:|.:|....:..|.:.|.||:|:: :
  Rat     6 DPESTEAIVAELHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCSPTEGELHDFIAEVEEEEPT 70

  Fly    65 GRLEFGEFVQLAAKFIVEEDAEAMQKE-LREAFRLYDKQGNGFIPTTCLKEILKELDDQ------ 122
            |.:.|.:|:.:....::|:....:.:: |..||.:.|....||:..   .|::|.:.::      
  Rat    71 GYIRFEKFIPVMTTVLLEKRYRPIAEDVLLRAFEVLDPTKRGFLTK---DELVKYMTEEGVLFPW 132

  Fly   123 ------------LTEQELDIMIEEIDSDGSGTVDFDEFMEMM 152
                        .:::|::.|:.......|.|:::.:::.||
  Rat   133 RLPLELELHGEPFSQEEMEEMLSAAIDPESNTINYRDYITMM 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 35/171 (20%)
Efcab2XP_038946462.1 PTZ00184 22..175 CDD:185504 31/156 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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