DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC73F and PHF24

DIOPT Version :9

Sequence 1:NP_001287091.1 Gene:TpnC73F / 39916 FlyBaseID:FBgn0010424 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_011516129.1 Gene:PHF24 / 23349 HGNCID:29180 Length:406 Species:Homo sapiens


Alignment Length:135 Identity:29/135 - (21%)
Similarity:51/135 - (37%) Gaps:44/135 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TPEQIAVLQKAFNSFDH--------QKTGSIPTEMVADILRLMGQPFDKKILEELIEEVDEDKSG 65
            |.||:..:..|.::|..        ::||.:|...             :..:|..::||.|:|..
Human    15 TVEQVQKVSLAVSAFKDGLRDRPSIRRTGELPGSR-------------RGTVEGSVQEVQEEKEA 66

  Fly    66 RLEFGEFVQLAAKFIVEEDAEAMQKELREAF-RLYDKQG---------NGFIPTTCLKEILKELD 120
            .         |...:|:|::.|.    |.|: ||.|.:|         :.|.|...::...|..|
Human    67 E---------AGTSVVQEESSAG----RAAWERLRDGRGVEPEEFDRTSRFTPPAFIRPTRKLDD 118

  Fly   121 DQLTE 125
            |:..|
Human   119 DKPPE 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC73FNP_001287091.1 PTZ00184 6..153 CDD:185504 29/135 (21%)
PHF24XP_011516129.1 Zf_RING 131..203 CDD:293349
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148541
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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