DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papst2 and ytfF

DIOPT Version :10

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_418631.2 Gene:ytfF / 948732 ECOCYCID:G7867 Length:321 Species:Escherichia coli


Alignment Length:336 Identity:71/336 - (21%)
Similarity:128/336 - (38%) Gaps:61/336 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 AGVFFLYILYGYLQELIFTVEGFKPYGWFLTLVQFGYYIGFGLVERRLEGYRISGGSFWNIEPEP 131
            :||.:. :|.|.:..|||......| .:...|...|.|:..||:...:.         |......
E. coli     3 SGVLYA-LLAGLMWGLIFVGPLIVP-EYPAMLQSMGRYLALGLIALPIA---------WLGRVRL 56

  Fly   132 RCIPMRTYLILAALTLGTMGLSNSSLGYLNY---------------PTQVIFKCCKLIPVLVGSI 181
            |.:..|.:|....||:         :|.|.|               .|.:|.....:|||...  
E. coli    57 RQLARRDWLTALMLTM---------MGNLIYYFCLASAIQRTGAPVSTMIIGTLPVVIPVFAN-- 110

  Fly   182 LIQGKRYGLLDFA----AATCMCIGLAWFTLAD-SQMTPNFN----LLGVAMISGALLCDAAIGN 237
            |:..:|.|.|.:.    |..|:.||||...:|: :...|:|:    ..|:.:...:::|.|....
E. coli   111 LLYSQRDGKLAWGKLAPALICIGIGLACVNIAELNHGLPDFDWARYTSGIVLALVSVVCWAWYAL 175

  Fly   238 VQEKAMREFKAPSSEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPVETFGYG----FLFSL 298
            ...:.:||  .|....:.::.....|.|.|.::  |...:.:....:.|..:..:|    ...||
E. coli   176 RNARWLRE--NPDKHPMMWATAQALVTLPVSLI--GYLVACYWLNTQTPDFSLPFGPRPLVFISL 236

  Fly   299 SGYLGI--QFVLALVRSSGAPIAATVTTARKAV--TIA---FSFVLFSKPFTLQYLWSGLIVVLG 356
            ...:.:  .:|.||..:..:.:..||......|  |:|   ::|:|..:...|..|....::|:|
E. coli   237 MVAIAVLCSWVGALCWNVASQLLPTVILGPLIVFETLAGLLYTFLLRQQMPPLMTLSGIALLVIG 301

  Fly   357 IYLNVYSKRNK 367
            :.:.|.:|..|
E. coli   302 VVIAVRAKPEK 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:462479 69/331 (21%)
ytfFNP_418631.2 RhaT 1..313 CDD:440461 71/336 (21%)

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