DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papst2 and bioP

DIOPT Version :10

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_418271.1 Gene:bioP / 948309 ECOCYCID:EG11471 Length:299 Species:Escherichia coli


Alignment Length:264 Identity:58/264 - (21%)
Similarity:98/264 - (37%) Gaps:56/264 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 YLILAALTLGTM-GLSNSSLGYLNYPTQVIFKCCKLIPVLVGSIL-IQGKRYGLLDFAAATCMCI 201
            |:::.|:.||.| .||..:..||.....::|..  |.|:.:..|. |..||.....:|.:..:.:
E. coli    60 YMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTV--LTPLYITLIYDIMSKRRLRWGYAFSALLAV 122

  Fly   202 GLAWFTLADSQMTPNFNLLGVAMISGALLCDA-----AIGNVQEKAMREFKAPSSEVVFYSYGLG 261
            ..|.....| |:|.:|       .:|.||...     |||.|..|.:.|.:.......|..:.||
E. coli   123 IGAGIIRYD-QVTDHF-------WTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLG 179

  Fly   262 -FVYLFVIMLVTGNFFSGFAFCLEHPVETFGYGFLFSLS------GYLGIQF--------VLALV 311
             |:...:...:.||       ..:.|..|..:|.|..|.      ||....:        .|.::
E. coli   180 AFLVAVIAWFLLGN-------AQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIM 237

  Fly   312 RSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSGLIVVLGIYLNVYSK----RNKLTLAD 372
            .:...|....|..|          :...:|....::...|:::..::  |:.|    |:..| ||
E. coli   238 NNMHVPAGLLVNLA----------IWHQQPHWPTFITGALVILASLW--VHRKWVAPRSSQT-AD 289

  Fly   373 VRQR 376
            .|:|
E. coli   290 DRRR 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:462479 51/246 (21%)
bioPNP_418271.1 2A78 11..273 CDD:273359 50/239 (21%)

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