DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Papst2 and yedA

DIOPT Version :10

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_416468.1 Gene:yedA / 946461 ECOCYCID:EG11141 Length:306 Species:Escherichia coli


Alignment Length:348 Identity:70/348 - (20%)
Similarity:122/348 - (35%) Gaps:106/348 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RTTQFLLSCAGVFFLYILYGYLQELI-FTVEGFKPYGWFLTLVQFGY-YIGFG---LVERRLEGY 117
            |..|.|.....:|.|||::|....:| ..||.:.|      |:..|. ::..|   |....|.|:
E. coli     2 RFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPP------LMMAGVRFLAAGILLLAFLLLRGH 60

  Fly   118 RISGGSFWNIEPEPRCIPMRTYLILAALTLGTMGLSNSSL---GYLNYPTQVIFKCCKLIPVLVG 179
            ::.              |:|..|..|.:.|..:.:.|..:   .:.|.|:.:.......:|:.. 
E. coli    61 KLP--------------PLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFT- 110

  Fly   180 SILIQGKRYGL----LDFAAATCMCIGLAWFTLADSQMTPNFNLLGVAMISGALLCDAAIGNVQE 240
              |...:.:|:    |::..   :.||||...:.:|    ..||.|...  ||:|  ..||::  
E. coli   111 --LCFSRLFGIKTRKLEWVG---IAIGLAGIIMLNS----GGNLSGNPW--GAIL--ILIGSI-- 160

  Fly   241 KAMREFKAPSSEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPVETFGYGFLF--------- 296
                            |:..|.||...|.|..|        .:...:|....|.:.         
E. coli   161 ----------------SWAFGSVYGSRITLPVG--------MMAGAIEMLAAGVVLMIASMIAGE 201

  Fly   297 ------SLSGYLGIQFV------------LALVRSSGAPIAATVTTARKAVTIAFSFVLFSKPFT 343
                  ||||:|.:.::            :.|:|:....:|.:.......|.:.....|..:..:
E. coli   202 KLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLS 266

  Fly   344 -LQYLWSGLI------VVLGIYL 359
             :::|..|:|      |.||.||
E. coli   267 KIEWLALGVIVFAVVLVTLGKYL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:462479 69/345 (20%)
yedANP_416468.1 PRK11272 1..292 CDD:183067 70/348 (20%)

Return to query results.
Submit another query.