DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Papst2 and UTR1

DIOPT Version :10

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_565290.1 Gene:UTR1 / 814811 AraportID:AT2G02810 Length:332 Species:Arabidopsis thaliana


Alignment Length:354 Identity:87/354 - (24%)
Similarity:144/354 - (40%) Gaps:64/354 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 YNRTTQFLLSCAGVFFLYILYGYLQELIFTVEGFKPYG---------WFLTLVQFGYYIGFGLVE 111
            :.|.....|..:|::..||..|.|||.:.|    |.:|         .||.|.|....:.:..:.
plant     8 FRRILLLALCISGIWSAYIYQGVLQETLST----KRFGPDEKRFEHLAFLNLAQSVVCLIWSYIM 68

  Fly   112 RRLEGYRISGGSFWNIEPEPRCIPMRTYLILAALTLGTMGLSNS--------SLGYLNYPTQVIF 168
            .:|.....:||:.|                   .|..:.|::|:        :|.|::||.||:.
plant    69 IKLWSNAGNGGAPW-------------------WTYWSAGITNTIGPAMGIEALKYISYPAQVLA 114

  Fly   169 KCCKLIPVLVGSILIQGKRYGLLDFAAATCMCIGLAWFTLADSQMT-------PNFNLLGVAMIS 226
            |..|:|||::...|:.|.||...::.....:..|::.|.|..:...       ||.. ||.|:.|
plant   115 KSSKMIPVMLMGTLVYGIRYTFPEYMCTFLVAGGVSIFALLKTSSKTISKLAHPNAP-LGYALCS 178

  Fly   227 GALLCDAAIGNVQEKAMREFKAPSSEVVFYSYGL---GFVYLFVIM--LVTGNFFSGFAFCLEHP 286
            ..|..|......|:.....:  |.:|......|:   |.:|..:.|  |..|..|....||..||
plant   179 LNLAFDGFTNATQDSIASRY--PKTEAWDIMLGMNLWGTIYNMIYMFGLPQGIGFKAIQFCKLHP 241

  Fly   287 VETFGYGFLFSLSGYLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSGL 351
            ...:.. ..:.:.|.:|..|:...:.:.|:....|:||.||.|:|..|.|:...|.:|:. |..:
plant   242 EAAWDI-LKYCICGAVGQNFIFMTISNFGSLANTTITTTRKFVSIVVSSVMSGNPLSLKQ-WGCV 304

  Fly   352 IVVL-GIYLNVYSKRNKLTLADVRQRIKQ 379
            .:|. |:...:|.|..||      ||:::
plant   305 SMVFGGLAYQIYLKWKKL------QRVEK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:462479 81/332 (24%)
UTR1NP_565290.1 UAA 14..318 CDD:462479 81/331 (24%)

Return to query results.
Submit another query.