DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Papst2 and Slc35f1

DIOPT Version :10

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001102808.1 Gene:Slc35f1 / 502421 RGDID:1559576 Length:408 Species:Rattus norvegicus


Alignment Length:317 Identity:74/317 - (23%)
Similarity:118/317 - (37%) Gaps:102/317 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 LVERRLEGYRISGGSFWNIEPEPRCIPMRTYLILAALTLGTMGLSNSSLGYLNYPTQVIFKCCKL 173
            ::.||...|.|.|  |.::|        ..||::.|....|:             |.|....|.:
  Rat   124 ILRRRWWKYMILG--FIDLE--------ANYLVVKAYQYTTL-------------TSVQLLDCFV 165

  Fly   174 IPVLV----GSILIQGKRYGLLDFAAATCMCIGLAWFTLAD-----------SQMTPNFNLLGVA 223
            |||::    ..:||   ||..:.|.......:|:.....||           :::..:..:||.|
  Rat   166 IPVVILLSWFFLLI---RYKAVHFIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGA 227

  Fly   224 MISGALLCDAAIGNV-QEKAMREFKAPSSEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFC-LEH- 285
            .:.|       |.|| :|..:|..    |.|.|    ||.:.||      |.||||.... :|| 
  Rat   228 TLYG-------ISNVWEESIIRTL----SRVEF----LGMIGLF------GAFFSGIQLAIMEHK 271

  Fly   286 ---------PVETFGYGF---LFSLSGYLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSFVLF 338
                     .:.....||   :|.|..::.:     :::.:.|      |:...::..|..:.||
  Rat   272 ELLKVPWDWQIGLLYVGFSACMFGLYSFMPV-----VIKKTSA------TSVNLSLLTADLYSLF 325

  Fly   339 SKPFTLQYLWSGL------IVVLGIYLNVYSKRNKLTLADVRQRIKQFGAKVARSPS 389
            ...|...|.:|||      .:::|:.|  ||..:.....|.|. .|||     |:||
  Rat   326 CGLFLFHYKFSGLYLLSFFTILIGLVL--YSSTSTYIAQDPRV-YKQF-----RNPS 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:462479 65/290 (22%)
Slc35f1NP_001102808.1 SLC35F 56..355 CDD:283644 65/290 (22%)

Return to query results.
Submit another query.