DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papst2 and Slc35b2

DIOPT Version :9

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001032292.1 Gene:Slc35b2 / 501103 RGDID:1565318 Length:431 Species:Rattus norvegicus


Alignment Length:360 Identity:89/360 - (24%)
Similarity:158/360 - (43%) Gaps:47/360 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GNSP------PSQRKSSTSESPPELRILCFDLTYYNRTTQFLLSCAGVFFLYILYGYLQELIFT- 85
            ||.|      |...::.|:||.|..::|           :.:...||:...|:.:|.|||.:.| 
  Rat    83 GNEPKAPDEVPLAPRTETAESTPSWQVL-----------KLVFCAAGLQVSYLTWGVLQERVMTG 136

  Fly    86 ---VEGFKPYGWFLTLVQFGYYIGFGLVERRLEGYRISGGSFWNIEPEPR-CIPMRTYLILAALT 146
               .....| |...|..||     ..|:.|.|.  .:..|.:..:..:|| ..||..|...:...
  Rat   137 SYGATATSP-GEHFTDSQF-----LVLMNRVLA--LVVAGLYCILRKQPRHGAPMYRYSFASLSN 193

  Fly   147 LGTMGLSNSSLGYLNYPTQVIFKCCKLIPVLVGSILIQGKRYGLLDFAAATCMCIGLAWFTLA-- 209
            :.:......:|.::::||||:.|..|:|||::...|:..:.|...::..|..:.||::.|.|:  
  Rat   194 VLSSWCQYEALKFVSFPTQVLAKASKVIPVMMMGKLVSRRSYEHWEYLTAGLISIGVSMFLLSSG 258

  Fly   210 -DSQMTPNFNLLGVAMISGALLCDAAIGNVQEKAMREFKAPSSEVVFYSYGLG-FVYLFVI--ML 270
             :.:.:|...|.|:.:::|.:..|:...|.|: |:..:|..|.:::|   |:. |..||.:  :|
  Rat   259 PEPRSSPATTLSGLVLLAGYIAFDSFTSNWQD-ALFAYKMSSVQMMF---GVNLFSCLFTVGSLL 319

  Fly   271 VTGNFFSGFAFCLEHPVETFGYGFLFSLSGYLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSF 335
            ..|....|..|...|. |...:..|.|:....|..|:...:...||.:...:.|.|:|:.|..|.
  Rat   320 EQGALLEGARFMGRHS-EFALHALLLSVCSAFGQLFIFYTIGQFGAAVFTIIMTLRQAIAILLSC 383

  Fly   336 VLFSKPFTLQYLWSGL---IVVLGIYLNVYSKRNK 367
            :|:....|:.   .||   :|...:.|.||::..|
  Rat   384 LLYGHTVTVV---GGLGVAVVFTALLLRVYARGRK 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:285625 79/316 (25%)
EamA 219..362 CDD:279264 37/148 (25%)
Slc35b2NP_001032292.1 UAA 111..412 CDD:285625 79/316 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0697
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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