DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papst2 and sll

DIOPT Version :9

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001247153.1 Gene:sll / 42115 FlyBaseID:FBgn0038524 Length:465 Species:Drosophila melanogaster


Alignment Length:399 Identity:90/399 - (22%)
Similarity:154/399 - (38%) Gaps:73/399 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ITINGGE---SAGNSPPSQRKSSTSESPPELRILCFDLTYYNRTTQFLLSCAGVFFLYILYGYLQ 80
            ||.|.|.   .||.|...:.:.:.|.:|..        |......|.|....|:...|:.:|.||
  Fly   107 ITGNSGYDQLDAGTSTADKDRPAASTAPKR--------TSSQEAVQLLWCFGGLMISYLTWGVLQ 163

  Fly    81 ELIFTVEGFKPYGWFLTLVQFGYYIGFG------------LVERRLEGYRISGGSF-WNIEPEPR 132
            |.|.|..                |:.|.            :...||..:.::.... |...|...
  Fly   164 EKIMTQN----------------YLNFTGESAKFKDSQFLVFSNRLLAFLVALAYLQWQPSPVRH 212

  Fly   133 CIPMRTYLILAALTLGTMGLSNSSLGYLNYPTQVIFKCCKLIPV-LVGSILIQGKRYGLLDFAAA 196
            ..|:..|...:...:.:......:|.::|:||||:.|.||:||| |:|.|:.:.| |...::..|
  Fly   213 RAPLYKYSYASFSNIMSAWFQYEALKFVNFPTQVLAKSCKIIPVMLMGKIMSKAK-YESYEYVTA 276

  Fly   197 TCMCIGLAWFTLADSQMTPN---FNLLGVAMISGALLCDAAIGNVQEKAMREFKAPSSEVVFYSY 258
            ..:.:|:.:|....|..:..   ..|.|:.::|..::.|:...|.|..            :|.||
  Fly   277 LLISLGMIFFMSGSSDSSKASGVTTLTGIFLLSMYMVFDSFTANWQGS------------LFKSY 329

  Fly   259 GL------------GFVYLFVIMLVTGNFFSGFAFCLEHPVETFGYGFLFSLSGYLGIQFVLALV 311
            |:            ..::....:.:.|.|....||..|||...|.. .:.|:...:|..|:...:
  Fly   330 GMTPLQMMCGVNLFSSIFTGASLSMQGGFMDSLAFATEHPKFVFDM-VVLSVCSAVGQLFIYHTI 393

  Fly   312 RSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYLWSGLIVVLGIYLNVYSKRNKLTLADVRQR 376
            ...|..:...:.|.|:||.|..|..::....:|..::..|||.:.|:|.||..:.   |..:|:|
  Fly   394 DVFGPVVFTIIMTLRQAVAIMLSCFIYQHSISLLGIFGVLIVFVAIFLRVYCTQR---LRAIRKR 455

  Fly   377 IKQFGAKVA 385
            .:....|:|
  Fly   456 AEANKPKMA 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:285625 75/331 (23%)
EamA 219..362 CDD:279264 34/154 (22%)
sllNP_001247153.1 UAA 144..444 CDD:285625 73/329 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451121
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0697
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10778
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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