DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papst2 and Slc35b1

DIOPT Version :9

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_954512.1 Gene:Slc35b1 / 287642 RGDID:727783 Length:322 Species:Rattus norvegicus


Alignment Length:349 Identity:97/349 - (27%)
Similarity:148/349 - (42%) Gaps:47/349 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 SSTSESPPELRI-LCFDLTYYNRTTQFLLSCAGVFFLYILYGYLQELIFT---VEGFK--PYGWF 95
            :|.|..|..||: |||               .|||..|..||.|||.|..   .||.|  .:.:.
  Rat     3 ASRSLVPDRLRLPLCF---------------LGVFVCYFYYGILQEKITRGKYGEGPKQETFTFA 52

  Fly    96 LTLVQFGYYIGFGLVERRLEGYRISGGSFWNIEPEPRCIPMRTYLILAALT--LGTMGLSNSSLG 158
            ||||.....|.....:..::.:..:           |....||:|..|...  :|.|..|||:|.
  Rat    53 LTLVFIQCVINAMFAKILIQFFDTA-----------RVDRTRTWLYAACSVSYVGAMVSSNSALQ 106

  Fly   159 YLNYPTQVIFKCCKLIPVLVGSILIQGKRYGLLDFAAATCMCIGLAWF------TLADSQMTPNF 217
            ::||||||:.|.||.|||::..:.:..|:|.|..:.....:..|:|.|      .:...:.|..|
  Rat   107 FVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGF 171

  Fly   218 NLLGVAMISGALLCDAAIGNVQEKAMREFKAPSSEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFC 282
               |..::..:|..|...|..|:.....::..|:.::........|.|...:|.||..:...:|.
  Rat   172 ---GELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTVLLGAGILFTGELWEFLSFA 233

  Fly   283 LEHPVETFGYGFLFSLSGYLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSFVLFSKPFTLQYL 347
            ..:|...:.. .||.|:..||..|:...|...|....:.:||.||..||..|.:||:.|.: ...
  Rat   234 ERYPTIIYNI-LLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPIS-SMQ 296

  Fly   348 WSGLIVV-LGIYLNV-YSKRNKLT 369
            |.|.::| ||:.|:. :.|..|.|
  Rat   297 WVGTVLVFLGLGLDAKFGKGTKKT 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:285625 86/317 (27%)
EamA 219..362 CDD:279264 37/144 (26%)
Slc35b1NP_954512.1 UAA 16..309 CDD:285625 88/323 (27%)
EamA <205..309 CDD:304911 30/105 (29%)
Di-lysine motif 318..322 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0697
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D440867at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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