DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papst2 and nstp-3

DIOPT Version :10

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_504521.2 Gene:nstp-3 / 191128 WormBaseID:WBGene00022577 Length:344 Species:Caenorhabditis elegans


Alignment Length:305 Identity:63/305 - (20%)
Similarity:100/305 - (32%) Gaps:109/305 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 LILAALTLGTMGLSNSSLGYLNYPTQVIF-------KCCKLIPVLVGSILIQGKRYGL-LDFAAA 196
            ::.:|:.:.|   :.|.:.|:|.....||       |.|  ||.|:  ..:|...|.: |....|
 Worm    56 VVCSAIMIYT---TKSVMKYINELKLAIFEHRSETLKVC--IPALI--YTLQNNLYYIALSHLEA 113

  Fly   197 TCMCIG----------LAWFTLADSQMTPNF-----NLLGVAMISGALLCDAAIGNVQEKAMREF 246
            |..||.          ..:|.|.....|..:     .:||||.|........|..:|::..|..|
 Worm   114 TTFCISYQMKIFTTAIFMYFFLGKKLSTKQWWALVLLVLGVADIQYVYSPPPASEDVEQNPMYGF 178

  Fly   247 KAPSSEVVFYSYGLGFVYLFVIMLVTGNFFSGFAFCLEHPVETFGYGFLFSLSGYLGIQFVLALV 311
            .|                     ::|..|.|.||                      |: ::..::
 Worm   179 MA---------------------VLTMCFTSAFA----------------------GV-YLEKVL 199

  Fly   312 RSSGAPIAATVTTARKA-VTIAFSFVLFSKPFTLQYL-------------WSGLIVVL------- 355
            :||.|.|  .|...|.| :.:..||:      ::.|.             |..::|.|       
 Worm   200 KSSNASI--WVQNIRLALIGLPISFL------SMWYYDWEKINEQGAFRGWDFVVVCLTVTNSVG 256

  Fly   356 GIYLNVYSKRNKLTLADVRQRIKQFGAKVAR------SPSRKFLI 394
            ||.::|..|.....|....|.:...||.|..      :|...||:
 Worm   257 GILISVVIKYADNILKAYAQSMAIIGAAVGSWILFDFAPGFMFLL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:462479 54/267 (20%)
nstp-3NP_504521.2 Nuc_sug_transp 6..314 CDD:398009 63/305 (21%)

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