DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Papst2 and nstp-7

DIOPT Version :10

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_503252.3 Gene:nstp-7 / 187072 WormBaseID:WBGene00019451 Length:356 Species:Caenorhabditis elegans


Alignment Length:394 Identity:77/394 - (19%)
Similarity:131/394 - (33%) Gaps:150/394 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KSSTSESPPELRIL-------CFDLTYYNRTTQFLLSCA---------GVFFLYIL---YGYLQE 81
            :.:.|.|.|.:|:|       ...:|.::....||:..|         .||.:.||   :..:..
 Worm    17 RENDSSSRPIIRVLFSVQLLSMIAVTTHHTAMPFLVKIANKSHFLPTTSVFMMEILKLSFCLIIV 81

  Fly    82 LIFTVEGFKP---------YGWFLTL----------VQFG-YYIGFGLVERRLEGYRISGGSFWN 126
            ||.|....|.         ..|:.|:          ||.. ||:...                 |
 Worm    82 LIETRSIRKTAKKLHKNIWQNWWETMKVSVPALVYAVQNNLYYVALA-----------------N 129

  Fly   127 IEPEPRCIPMRTYLILAALTLGTMGLSNSSLGYLNYPTQVIFKCCKLIPVLVGSILIQGKRYGLL 191
            |:.....:.::..::..|: |..:.||....|| .:..|.:        .|:|.|::|      |
 Worm   130 IDATTYSVTLQLRILTTAI-LSVVLLSKKLSGY-QWMAQGM--------ALIGVIVVQ------L 178

  Fly   192 DFAAATCMCIGLAWFTLADSQMTPNFNLLGVAMISGALLCDAAIGNVQEKAMREFKAPSSEVVFY 256
            |.:.:.....|..|              ||:|.:.|.....|..|...||.:   |..|::|...
 Worm   179 DNSNSRREIAGNFW--------------LGLASVLGMCWTSAFAGVYFEKML---KNSSADVWIQ 226

  Fly   257 SYGLGFVYLF---VIML-------VTGNFFSGFAF--------------CL-------EHPVETF 290
            :..|..:.|.   :.||       :|||.|.|:.:              |:       ::.::|:
 Worm   227 NIRLSILTLLFAGITMLSKDGDAIITGNIFHGWTWIVWLVTIGNSIGGLCISLVMKYADNVMKTY 291

  Fly   291 ------GYGFLFS-------LSGYLGIQFVLALVRSSGAPIAATVTTARKAVTIAFSFVLFSKPF 342
                  |:..:.|       ||.|||  :.:.||.||               .:.:|....::|.
 Worm   292 CQSLAIGFTSIVSICLGDRLLSLYLG--YGVFLVTSS---------------VVVYSLYPATQPT 339

  Fly   343 TLQY 346
            |..|
 Worm   340 TPNY 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:462479 71/362 (20%)
nstp-7NP_503252.3 Nuc_sug_transp 60..331 CDD:398009 64/337 (19%)

Return to query results.
Submit another query.