DRSC/TRiP Functional Genomics Resources

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Protein Alignment Papst2 and nstp-8

DIOPT Version :10

Sequence 1:NP_648954.1 Gene:Papst2 / 39914 FlyBaseID:FBgn0036695 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_503604.2 Gene:nstp-8 / 178698 WormBaseID:WBGene00018414 Length:351 Species:Caenorhabditis elegans


Alignment Length:330 Identity:57/330 - (17%)
Similarity:115/330 - (34%) Gaps:85/330 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 TTQFLLSCAGVFFLYILYGYLQELIFTVEGFKPYG-------WFLTLVQFGYYIGFGLVERRLEG 116
            |:.|::....:.|..|:      ::|..:.|:..|       |                :.|:|.
 Worm    62 TSVFMMEVLKLLFCLII------VLFKTKSFEKTGKKLYEHIW----------------KNRVET 104

  Fly   117 YRISGGSFWNIEPEPRCIPMRTYLILAALTLGTMGLSNSSLGYLNYPTQVIFKCCKLIPVLVGSI 181
            .::|             :|...|.|       ...|...:|..::..|..:....:::...:.|:
 Worm   105 LKVS-------------VPAVVYAI-------QNNLYYIALANIDATTYSVTVQLRILTTALLSV 149

  Fly   182 LIQGKRYGLLDFAAATCMCIGLAWFTLADS----QMTPNFNLLGVAMISGALLCDAAIGNVQEKA 242
            :|..::.....:.|.....||:....:.:|    ::..|| .||:..:.|........|...||.
 Worm   150 IILNQKLSNYQWLAQGMALIGVVLVQIDNSNPHGKVFGNF-WLGITAVFGMCWTSGFAGVYFEKM 213

  Fly   243 MREFKAPSSEVVFYSYGLGFVYLF---VIML-------VTGNFFSGFAFCLEHPVETFGYGFL-- 295
            ::|   .|::|...:..|..:.|.   :.||       :||..|             ||:.::  
 Worm   214 LKE---SSADVWVQNIRLSTLTLLFAGITMLSTDGEAVLTGKMF-------------FGWNWIVW 262

  Fly   296 FSLSGYLGIQFVLALVRSSGAPIAATVTTARK-AVTIAFSFVLFSKPFTLQYLWSGLIVVLGIYL 359
            |...|...:...::||......:..|...:.. .:|...|..|..:..::..::..|:|...|. 
 Worm   263 FVTIGNSIVGLCISLVMKYADNVMKTYCQSLAIGLTAIVSIFLGDRTLSIDLIYGVLLVTSSIV- 326

  Fly   360 NVYSK 364
             |||:
 Worm   327 -VYSR 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Papst2NP_648954.1 UAA 61..364 CDD:462479 55/326 (17%)
nstp-8NP_503604.2 Nuc_sug_transp 31..329 CDD:398009 55/327 (17%)

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